pip install ipython-cluster-helper==0.6.4

Simplify IPython cluster start up and use for multiple schedulers.

Source
Among top 10% packages on PyPI.
Over 7.5K downloads in the last 90 days.

Commonly used with ipython-cluster-helper

Based on how often these packages appear together in public requirements.txt files on GitHub.

cyvcf

A fast Python library for VCF files using Cython for speed.

gffutils

Work with GFF and GTF files in a flexible database framework

bcbio-nextgen

Best-practice pipelines for fully automated high throughput sequencing analysis

fadapa

FAstqc DAta PArser - A minimal parser to parse FastQC output data in Python

bcbreport

report templates for bcbio analysis.

chanjo

Coverage analysis tool for clinical sequencing

pythonpy

python -c, with tab completion and shorthand

cutadapt

trim adapters from high-throughput sequencing reads

pybedtools

Wrapper around BEDTools for bioinformatics work

bioblend

CloudMan and Galaxy API library

arvados-python-client

Arvados client library

cyvcf2

fast vcf parsing with cython + htslib

canvas

canvas is a simple interface to most common matplotlib functions

smashbenchmarking

Check the accuracy of one VCF callset against another

metaseq

Integrative analysis of high-thoughput sequencing data

svtyper

Bayesian genotyper for structural variants

beagle

Command line client for Hound

ngsutils

NGSUtils - Various utilities for working with NGS data

ncbi-genome-download

Download genome files from the NCBI FTP server.

Version usage of ipython-cluster-helper

Proportion of downloaded versions in the last 3 months (only versions over 1%).

0.3.0

16.05%

0.6.4

5.55%

0.6.2

3.08%

0.6.1

2.62%

0.6.3

1.92%

0.6.0

1.73%

0.5.7

1.72%

0.5.6

1.71%

0.5.9

1.71%

0.5.8

1.71%

0.5.4

1.69%

0.5.3

1.68%

0.5.5

1.68%

0.5.2

1.67%

0.5.1

1.65%