pip install beagle==0.3.0

Command line client for Hound

Source
Among top 3% packages on PyPI.
Over 51.5K downloads in the last 90 days.

Commonly used with beagle

Based on how often these packages appear together in public requirements.txt files on GitHub.

svtyper

Bayesian genotyper for structural variants

smashbenchmarking

Check the accuracy of one VCF callset against another

svtools

Tools for processing and analyzing structural variants

metaseq

Integrative analysis of high-thoughput sequencing data

manta

A Python SDK for Joyent's Manta service

shapeit

It's Shapely with projections and some other conveniences!

mosaik

Mosaik is a flexible Smart-Grid co-simulation framework.

ngsutils

NGSUtils - Various utilities for working with NGS data

pysamstats

A Python utility for calculating statistics against genome position based on sequence alignments from a SAM, BAM or CRAM file.

adam

Adam programming language implemented in python

sourmash

tools for comparing DNA sequences with MinHash sketches

ncbi-genome-download

Download genome files from the NCBI FTP server.

canvas

canvas is a simple interface to most common matplotlib functions

skewer

Enumerate AWS resources and index them in ElasticSearch

mosaik-householdsim

A simple simulator for household profiles.

mosaik-csv

Presents CSV datasets to mosaik as models.

mosaik-web

A simple simulation visualization for the browser.

mosaik-pypower

An adapter to use PYPOWER with mosaik.

mosaik-api

Python implementation of the mosaik API.

Version usage of beagle

Proportion of downloaded versions in the last 3 months (only versions over 1%).

0.3.0

97.88%