pip install cyvcf==0.1.16
A fast Python library for VCF files using Cython for speed.
SourceAmong top 50% packages on PyPI.
Over 3.0K downloads in the last 90 days.
cyvcf
Based on how often these packages appear together in public
requirements.txt
files on GitHub.
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Simplify IPython cluster start up and use for multiple schedulers. |
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Best-practice pipelines for fully automated high throughput sequencing analysis |
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FAstqc DAta PArser - A minimal parser to parse FastQC output data in Python |
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Coverage analysis tool for clinical sequencing |
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report templates for bcbio analysis. |
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Work with GFF and GTF files in a flexible database framework |
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python -c, with tab completion and shorthand |
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trim adapters from high-throughput sequencing reads |
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CloudMan and Galaxy API library |
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Arvados client library |
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Wrapper around BEDTools for bioinformatics work |
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fast vcf parsing with cython + htslib |
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canvas is a simple interface to most common matplotlib functions |
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Check the accuracy of one VCF callset against another |
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Integrative analysis of high-thoughput sequencing data |
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Bayesian genotyper for structural variants |
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Command line client for Hound |
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Tools for processing and analyzing structural variants |
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A Python SDK for Joyent's Manta service |
cyvcfProportion of downloaded versions in the last 3 months (only versions over 1%).
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0.1.16 |
26.90% |
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0.1.14 |
18.65% |
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0.1.9.2 |
11.42% |
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0.1.13 |
6.35% |
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0.1.12 |
6.32% |
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0.1.10 |
6.29% |
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0.1.15 |
4.02% |
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0.1.11 |
3.48% |
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0.1.9.1 |
3.35% |
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0.1.7 |
3.31% |
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0.1.6 |
3.31% |
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0.1.8 |
3.31% |
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0.1.9 |
3.28% |