pip install sourmash==4.2.2
tools for comparing DNA sequences with MinHash sketches
SourceAmong top 5% packages on PyPI.
Over 17.7K downloads in the last 90 days.
sourmash
Based on how often these packages appear together in public
requirements.txt
files on GitHub.
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NGSUtils - Various utilities for working with NGS data |
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tools for comparing DNA sequences with MinHash sketches |
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Adam programming language implemented in python |
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Mosaik is a flexible Smart-Grid co-simulation framework. |
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A Python SDK for Joyent's Manta service |
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Tools for processing and analyzing structural variants |
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Command line client for Hound |
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Integrative analysis of high-thoughput sequencing data |
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A Python utility for calculating statistics against genome position based on sequence alignments from a SAM, BAM or CRAM file. |
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Bayesian genotyper for structural variants |
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It's Shapely with projections and some other conveniences! |
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Check the accuracy of one VCF callset against another |
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canvas is a simple interface to most common matplotlib functions |
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Enumerate AWS resources and index them in ElasticSearch |
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A simple simulator for household profiles. |
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Presents CSV datasets to mosaik as models. |
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A simple simulation visualization for the browser. |
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An adapter to use PYPOWER with mosaik. |
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Python implementation of the mosaik API. |
sourmashProportion of downloaded versions in the last 3 months (only versions over 1%).
|
4.2.2 |
13.79% |
|
2.3.1 |
5.65% |
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2.3.0 |
5.06% |
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4.2.1 |
4.47% |
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4.2.0 |
3.94% |
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2.1.0 |
3.33% |
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4.1.2 |
3.28% |
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2.2.0 |
3.26% |
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2.0.0 |
3.18% |
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2.0.1 |
3.17% |
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2.0.0a11 |
3.05% |
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4.1.1 |
3.03% |
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4.1.0 |
2.98% |
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3.5.1 |
2.82% |
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4.0.0 |
2.66% |
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4.0.0rc2 |
2.48% |
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4.0.0rc1 |
2.46% |
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3.3.1 |
1.99% |
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3.4.0 |
1.87% |
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3.4.1 |
1.87% |
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3.5.0 |
1.87% |
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2.0.0a8 |
1.82% |
|
2.0.0a10 |
1.60% |
|
2.0.0a9 |
1.57% |
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4.0.0a3 |
1.57% |
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3.3.0 |
1.53% |
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4.0.0a2 |
1.32% |
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3.2.3 |
1.19% |
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3.0.0 |
1.18% |
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3.2.1 |
1.15% |
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3.2.2 |
1.14% |
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3.1.0 |
1.13% |
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3.0.1 |
1.12% |
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3.2.0 |
1.12% |
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3.0.0rc1 |
1.10% |