pip install pypairix==0.3.7
Pypairix is a Python module for fast querying on a pairix-indexed bgzipped text file that contains a pair of genomic coordinates per line. For more information, see: https://github.com/4dn-dcic/pairix/blob/master/README.md.
SourceAmong top 50% packages on PyPI.
Over 4.5K downloads in the last 90 days.
pypairix
Based on how often these packages appear together in public
requirements.txt
files on GitHub.
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pyfaidx: efficient pythonic random access to fasta subsequences |
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Classes to handle bioinformatics data |
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Crayon client for python |
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Editable interval tree data structure for Python 2 and 3 |
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Extract unique Python exceptions with their traceback from a log file. |
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Sphinx extension for rendering data files as nice HTML |
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A library to bump / pin your dependency requirements. |
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Unambiguous representation of modified DNA, RNA, and proteins |
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Lightweight, super fast library for sequence alignment using edit (Levenshtein) distance. |
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cythonized function to compare reads by name |
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Mean, weighted mean, median, weighted median |
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[Deprecated] Use Markdown for your project description |
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Generic Testing Framework & Tool that unifies all types of testing. |
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A tool for generating strings based on a preset naming convention. |
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A utility for interacting with data from git repositories as Pandas dataframes |
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['GWAS analysis'] |
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['GWAS Parser Library'] |
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Fast and direct raster I/O for use with Numpy and SciPy |
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PYBOSSA command line client |
pypairixProportion of downloaded versions in the last 3 months (only versions over 1%).
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0.3.7 |
45.11% |
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0.3.6 |
3.26% |
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0.3.5 |
3.21% |
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0.3.4 |
2.79% |
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0.3.0 |
1.63% |
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0.1.7 |
1.63% |
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0.0.1 |
1.61% |
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0.3.1 |
1.61% |
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0.2.1 |
1.61% |
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0.2.7 |
1.61% |
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0.2.4 |
1.61% |
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0.1.6 |
1.61% |
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0.2.8 |
1.61% |
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0.1.4 |
1.58% |
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0.3.2 |
1.58% |
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0.2.2 |
1.58% |
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0.3.3 |
1.58% |
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0.0.9 |
1.58% |
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0.1.9 |
1.58% |
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0.1.5 |
1.58% |
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0.2.0 |
1.58% |
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0.2.5 |
1.58% |
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0.0.5 |
1.56% |
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0.2.6 |
1.56% |
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0.1.3 |
1.56% |
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0.1.2 |
1.56% |
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0.1.1 |
1.56% |
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0.0.8 |
1.54% |
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0.1.0 |
1.52% |
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0.0.4 |
1.52% |
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0.0.3 |
1.49% |
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0.0.6 |
1.49% |
|
0.0.2 |
1.49% |