pip install pyfaidx==0.6.3.1
pyfaidx: efficient pythonic random access to fasta subsequences
SourceAmong top 2% packages on PyPI.
Over 111.6K downloads in the last 90 days.
pyfaidx
Based on how often these packages appear together in public
requirements.txt
files on GitHub.
Classes to handle bioinformatics data |
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Pypairix is a Python module for fast querying on a pairix-indexed bgzipped text file that contains a pair of genomic coordinates per line. For more information, see: https://github.com/4dn-dcic/pairix/blob/master/README.md. |
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Unambiguous representation of modified DNA, RNA, and proteins |
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Fast and direct raster I/O for use with Numpy and SciPy |
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Sphinx extension for rendering data files as nice HTML |
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Module enablig a sh like infix syntax (using pipes) |
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Mean, weighted mean, median, weighted median |
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Tools for data |
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Trivially Up a cluster of programs, such as a Kafka cluster |
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Slim yet handsome validation library |
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Planet API Client |
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A Python package for gamma-ray astronomy |
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A library to bump / pin your dependency requirements. |
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JSON5 serializer and parser for Python 3 written in Cython. |
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None |
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ZeroMQ integration with asyncio. |
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Lightweight argument parsing using a decorator |
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COmparative GENomics Toolkit |
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Freely available tools for computational molecular biology. |
pyfaidx
Proportion of downloaded versions in the last 3 months (only versions over 1%).
0.6.2 |
45.17% |
0.5.9.5 |
23.77% |
0.6.3.1 |
7.72% |
0.6.1 |
7.01% |
0.5.5.2 |
5.13% |
0.4.8.2 |
2.26% |
0.5.9.2 |
1.63% |