intervaltree | Python Package Wiki

Based on how often these packages appear together in public requirements.txt files on GitHub.

cyordereddict	Cython implementation of Python's collections.OrderedDict
pypairix	Pypairix is a Python module for fast querying on a pairix-indexed bgzipped text file that contains a pair of genomic coordinates per line. For more information, see: https://github.com/4dn-dcic/pairix/blob/master/README.md.
pythomics	A multi-omic python package
empyrical	empyrical is a Python library with performance and risk statistics commonly used in quantitative finance
admiral	Simple python high-performance computing cluster batch submission
setuptools-markdown	[Deprecated] Use Markdown for your project description
feather-format	Simple wrapper library to the Apache Arrow-based Feather File Format
pycrayon	Crayon client for python
pysam	pysam
plotly-geo	geo shape files for use with plotly.py
edlib	Lightweight, super fast library for sequence alignment using edit (Levenshtein) distance.
compare-reads	cythonized function to compare reads by name
xgboost	XGBoost Python Package
rasterstats	Summarize geospatial raster datasets based on vector geometries
cythrust	Cython bindings for the Thrust parallel library.
rpy2	Python interface to the R language (embedded R)
kaleido	Static image export for web-based visualization libraries with zero dependencies
xarray	N-D labeled arrays and datasets in Python
pyinter	An interval package for Python.

`pip install intervaltree==3.1.0`