pip install loompy==3.0.6

Work with Loom files for single-cell RNA-seq data

Source
Among top 5% packages on PyPI.
Over 27.3K downloads in the last 90 days.

Commonly used with loompy

Based on how often these packages appear together in public requirements.txt files on GitHub.

kopt

Keras-hyperopt (kopt); Hyper-parameter tuning for Keras using hyperopt.

scvi

Single-cell Variational Inference

DCA

Count autoencoder for scRNA-seq denoising

numpy-groupies

Optimised tools for group-indexing operations: aggregated sum and more.

loompy

Work with Loom files for single-cell RNA-seq data

legacy-api-wrap

Legacy API wrapper.

anndata

Annotated Data.

scanpy

Single-Cell Analysis in Python.

hyperopt

Distributed Asynchronous Hyperparameter Optimization

bingraphvis

None

keras-vis

Neural Network visualization toolkit for keras

scikit-optimize

Sequential model-based optimization toolbox.

chazutsu

The tool to make NLP datasets ready to use

sinfo

sinfo outputs version information for modules loaded in the current session, Python, and the OS.

gedcompy

Parse and create GEDCOM (genealogy) files

dwave-system

All things D-Wave System.

minorminer

heuristic algorithm to find graph minor embeddings

pygraphml

Library to parse GraphML files in Python

openvpn-status

Parse OpenVPN status logs in Python

Version usage of loompy

Proportion of downloaded versions in the last 3 months (only versions over 1%).

3.0.6

61.29%