pip install snakemake==6.10.0
Snakemake is a workflow management system that aims to reduce the complexity of creating workflows by providing a fast and comfortable execution environment, together with a clean and modern specification language in python style. Snakemake workflows are essentially Python scripts extended by declarative code to define rules. Rules describe how to create output files from input files.
SourceAmong top 2% packages on PyPI.
Over 73.8K downloads in the last 90 days.
snakemake
Based on how often these packages appear together in public
requirements.txt
files on GitHub.
|
Powerful data structures for data analysis, time series, and statistics |
|
|
jupyter serverextension providing configuration interfaces for nbextensions. |
|
|
Client library for accessing Cortical.io's Retina API. |
|
|
Python functions for flattening a JSON object to a single dictionary of pairs, and unflattening that dictionary back to a JSON object |
|
|
The next generation MusicBrainz tagger |
|
|
Data package representation for cell migration tracking data |
|
|
Generate Pandas data frames, load and extract data, based on JSON Table Schema descriptors. |
|
|
Really Incredibly Point Less presentation tools |
|
|
Create a gist from the Jupyter Notebook UI |
|
|
Compute statistics and regression in one pass |
|
|
So U Found A Mutation? |
|
|
Ancestral sequence reconstruction using Python |
|
|
Pandas for phylogenetics |
|
|
Interactive Phylogenetic trees in Vega from Python. |
|
|
Automatically download and upload data for the Numerai machine learning competition |
|
|
pure python 3.x download utility |
|
|
A slim tensorflow wrapper that provides syntactic sugar for tensor variables. |
|
|
Log, catalogue, and move python objects via pickling |
|
|
Another python package for defensive data analysis. |
snakemakeProportion of downloaded versions in the last 3 months (only versions over 1%).
|
6.8.0 |
11.15% |
|
6.9.1 |
10.47% |
|
6.7.0 |
9.68% |
|
5.27.4 |
8.94% |
|
6.10.0 |
6.68% |
|
6.5.5 |
3.37% |
|
5.32.2 |
3.18% |
|
4.8.0 |
3.10% |
|
6.6.1 |
2.61% |
|
6.8.1 |
2.48% |
|
5.26.1 |
2.45% |
|
6.4.0 |
2.34% |
|
6.4.1 |
2.33% |
|
6.5.3 |
1.84% |
|
6.0.2 |
1.37% |
|
6.3.0 |
1.35% |
|
5.10.0 |
1.11% |
|
5.25.0 |
1.10% |