pip install qiime==1.9.1

Quantitative Insights Into Microbial Ecology

Source
Among top 50% packages on PyPI.
Over 1.3K downloads in the last 90 days.

Commonly used with qiime

Based on how often these packages appear together in public requirements.txt files on GitHub.

ipymd

Use the IPython notebook as an interactive Markdown editor

docstamp

A SVG and LateX template renderer from table data based on Inkscape and Jinja2

qiime-default-reference

Default reference data files for use with QIIME.

pycrayon

Crayon client for python

git-pandas

A utility for interacting with data from git repositories as Pandas dataframes

twentyc.tmpl

template abstraction and helper functions

hydra-base

A data manager for networks

imgur-downloader

Python script/class to download an entire Imgur album in one go into a folder of your choice

gallery-dl

Command-line program to download image-galleries and -collections from several image hosting sites

opusxml

Python library to read and convert OPUSXML files

travis-encrypt

Encrypt passwords for use with Travis CI.

sima

Software for analysis of sequential imaging data

bolt-python

Unified and scalable interface for multidimensional arrays

pyacd

python API to EMBOSS ACD files

pycolorterm

PyColorTerm allows you to write colored and styled lines out in the terminal from Python and in a pythonic way

fleet

A python client for the fleet v1 API

burrito

Framework for wrapping and controlling command-line applications.

nba_py

A python facing API for stats.nba.com

uflash

A module and utility to flash Python onto the BBC micro:bit.

Version usage of qiime

Proportion of downloaded versions in the last 3 months (only versions over 1%).

1.9.1

43.82%

1.8.0

33.72%

1.9.0

17.53%

1.7.0-dev

4.93%