pip install illumina-utils==2.12

monty

Monty is the missing complement to Python.

pyani

pyani provides a package and script for calculation of genome-scale average nucleotide identity.

pystackreg

Python implementation of the ImageJ/FIJI Plugin TurboReg/StackReg

pymatgen

Python Materials Genomics is a robust materials analysis code that defines core object representations for structures and molecules with support for many electronic structure codes. It is currently the core analysis code powering the Materials Project (https://www.materialsproject.org).

tribad

Python binding to the triangle library

gFlex

One- and two-dimensional plate bending, designed for Earth's lithosphere

runtests

Simple testing of fresh package builds using pytest, with optional mpi4py support

mcfit

Multiplicatively convolutional fast integral transforms

classylss

lightweight Python binding of the CLASS CMB Boltzmann code

Corrfunc

Blazing fast correlation functions on the CPU

cachey

Caching mindful of computation/storage costs

pmesh

Particle Mesh in Python

kdcount

A slower KDTree cross correlator

mpsort

python binding of MP-sort, a peta scale sorting routine

bigfile

python binding of BigFile, a peta scale IO format

weightedstats

Mean, weighted mean, median, weighted median

panedr

Read and manipulate Gromacs energy files

pymultinest

Access modules for the MultiNest and Cuba integration libraries

clickmodels

Probabilistic models of user behavior on a search engine result page

2.12

29.97%

2.11

4.27%

2.10

3.61%

2.7

3.39%

2.9

3.14%

2.8

2.80%

2.6

2.61%

1.4.3

2.48%

2.0.2

2.26%

2.0.1

2.23%

2.3

2.23%

2.4

2.20%

2.1

2.20%

1.2

2.20%

1.5.0

2.20%

2.4.1

2.20%

2.2

2.20%

1.4

2.20%

2.5

2.20%

1.1

2.17%

1.3

2.17%

1.4.6

2.17%

1.4.2

2.14%

1.4.5

2.14%

2.0.0

2.14%

1.0

2.14%

1.4.8

2.10%

1.4.1

2.10%

1.4.4

2.10%

1.4.7

2.04%